PuzzleSeg
One-Stop Platform for Online Pathology Annotation
Secure · Efficient · Modular · All-Scenario Adaptation
PuzzleSeg is an advanced and user-friendly web pathology annotation platform launched by PuzzleLogic for university-hospital research collaboration, pathology teaching and training, and clinical database construction. Through secure data governance framework and AI-assisted annotation modules, PuzzleSeg seamlessly connects clinical data collection-annotation-quality review with multi-scale research database construction, significantly improving data quality and model training efficiency.

Core Product Features
Explore PuzzleSeg's core feature highlights and experience advanced pathology annotation technology

Browser-based Cross-platform Experience
Pure web experience supporting Windows/macOS/Linux and tablet touch interfaces, no local installation required, ready to use immediately
Browser-based Cross-platform Experience
Pure web experience supporting Windows/macOS/Linux and tablet touch interfaces, no local installation required, ready to use immediately

PuzzleSeg Core Solutions
Comprehensive solutions addressing core challenges in pathology annotation
Challenge
PuzzleSeg Solution
Data Security & Compliance
Private deployment with fine-grained permission isolation, encrypted transmission, and comprehensive audit trails to meet hospital-grade compliance requirements
Efficient & Transparent Collaboration
Role-based annotation-review workflow with integrated task distribution, real-time progress tracking, and online quality control
Significant Cost Reduction
AI-powered automatic segmentation combined with quick terminology library to dramatically reduce manual effort and time investment
Seamless Ecosystem Integration
Deep integration with MCP diagnostic assistance and UnPuzzle training platform to create a complete training-validation closed loop
Cross-platform Accessibility
Pure web-based experience supporting Windows/macOS/Linux and tablet touch interfaces with zero local installation requirements
PuzzleSeg Core Feature Highlights
PuzzleSeg is committed to providing secure and user-friendly one-stop Web solutions for pathology teaching and research collaboration. The platform integrates data security governance with multi-user collaboration mechanisms to enable clinical data annotation and research database construction. The platform flexibly supports modular MCP tool integration for AI-assisted annotation, and through UnPuzzle AI module deployment, easily completes productization validation of research outcomes.
Cross-platform Native Browser Experience
Pure Web access with no installation required; Chrome/Edge/Safari ready-to-use, low learning and maintenance costs, full coverage of desktop and mobile office scenarios.
Secure Data Organization and Management
Multi-project isolation, encrypted transmission, combined with flexible permission management to ensure data security and traceability.
Role-based Hierarchical Collaboration
Annotation-review dual-role design, supporting task distribution, progress tracking, and review error correction for efficient data quality control and team collaboration.
Multi-scale WSI/ROI Browsing and Fine Annotation
Arbitrary magnification switching at 10×/40×/200×, lasso, polygon, freehand, eraser and other tools to meet regional to cellular-level delineation needs.
Quick Terminology Library
Users can customize/manage common diagnostic and pathological dictionaries, one-click insertion of annotations to improve input efficiency.
AI-assisted Annotation (MCP Integration)
Embedded AI plugins automatically recommend annotation segmentation drafts, completing refinement within three steps of select/modify/confirm, significantly improving efficiency.
Research Integration (UnPuzzle Integration)
Integrated with UnPuzzle framework, data automatically organized into database for training and validation, supporting multi-scale model training and clinical loop validation evidence tracing.
Research Deployment (UnPuzzle Integration)
Quick integration of self-developed large and small models, define hotkey calls, complete testing and iteration within the annotation system, accelerating research outcome implementation.
Typical Application Scenarios
Comprehensive application covering teaching, research, and clinical scenarios
Medical School Teaching
Teachers assign annotation assignments, students complete them online, instructors review and grade uniformly
Multi-center Research
University-hospital collaborative annotation of massive WSI to quickly build high-quality research cohorts
Enterprise-Hospital Cooperation
Leveraging PuzzleSeg + UnPuzzle to achieve end-to-end closed loop from data collection to AI model deployment
Modular Ecosystem Integration
Pluggable, iterative, and scalable complete solutions
Data Layer
PuzzleSeg Data Governance Framework
Model Layer
MCP Diagnostic Assistance / UnPuzzle Training-Inference Interface
Application Layer
Web Annotation, Quality Control, Progress Management Plugins
Ecosystem Loop
Data Layer
PuzzleSeg Data Governance Framework
Model Layer
MCP Diagnostic Assistance / UnPuzzle Training-Inference Interface
Application Layer
Web Annotation, Quality Control, Progress Management Plugins
Modular design ensures pluggable, iterative, and scalable: workflows can be quickly customized according to project requirements in the future, continuously improving annotation efficiency and model performance.
Request Licence
PuzzleSeg provides professional pathology annotation solutions. Contact us to learn more and request a trial account.